Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFW95779.1Hypothetical protein. (182 aa)    
Predicted Functional Partners:
ccmM
Ribulose bisphosphate carboxylase small chain.
    
 
 0.874
AFW95778.1
MFS family sulfate transporter.
  
  
 0.812
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.554
AFW94343.1
Ferripyochelin binding protein.
    
 
 0.502
ccmN
Carbon dioxide concentrating mechanism protein.
    
 
 0.502
AFW95535.1
Hypothetical protein.
  
     0.497
rbcS
Ribulose-bisphosphate carboxylase small subunit.
    
 
 0.491
AFW94125.1
Ribulose bisphosphate carboxylase activase.
    
 
 0.491
AFW94172.1
Hypothetical protein.
  
     0.425
AFW95777.1
Hypothetical protein.
       0.425
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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