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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilTPilus retraction protein PilT. (366 aa)    
Predicted Functional Partners:
pilM
Type IV pilus assembly protein PilM.
 
   
 0.938
AFW95883.1
Type II secretion system protein F.
 
  
 0.923
AFW94365.1
Prepilin signal peptidase-like protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
   
 0.832
AFW95881.1
Type II secretion system protein E.
 
  
0.776
dprA
DNA protecting protein DprA.
      
 0.558
AFW94932.1
General secretion pathway protein H.
  
     0.530
AFW94744.1
Signal transduction sensor and regulator protein.
 
   
 0.508
AFW94315.1
Competence protein ComEC/Rec2-like protein.
     
 0.452
AFW93111.1
IS4 family transposase.
      
 0.449
AFW95826.1
IS4 family transposase.
      
 0.449
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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