STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW96010.1D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (526 aa)    
Predicted Functional Partners:
gpmI
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
     
 0.905
AFW96392.1
Uridine kinase.
     
 0.904
mcyG
Peptide synthetase polyketide synthase fusion protein McyG.
  
 
 0.711
AFW95287.1
Aminotransferase class V/cysteine desulfurase.
 
 
 0.689
AFW95039.1
Phosphoribulokinase.
   
  0.671
prk
Phosphoribulokinase.
   
  0.671
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
   0.639
mcyD
Polyketide synthase type 1 McyD.
  
 
 0.616
mcyA
Nonribosomal peptide sythetase McyA.
  
 
 0.595
AFW93705.1
Histone deacetylase-like protein.
  
 
 0.580
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.