Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFW96037.1Hypothetical protein. (217 aa)    
Predicted Functional Partners:
AFW93964.1
NurA domain-containing protein.
 
     0.790
AFW96789.1
Hypothetical protein.
 
     0.780
sbcC
Exonuclease SbcC.
 
     0.777
AFW96593.1
Transglutaminase domain-containing protein.
  
     0.765
sbcD
Nuclease SbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
 
     0.762
AFW94418.1
Hypothetical protein.
  
     0.699
apcE
Phycobilisome linker polypeptide ApcE; Belongs to the phycobilisome linker protein family.
  
     0.692
AFW93033.1
OstA family protein.
  
     0.674
AFW94805.1
Hypothetical protein.
  
     0.665
AFW95582.1
Hypothetical protein.
  
     0.603
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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