Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFW96192.1Hypothetical protein. (87 aa)    
Predicted Functional Partners:
AFW93437.1
Hypothetical protein.
  
     0.624
AFW93463.1
Hypothetical protein.
  
     0.549
AFW95461.1
Hypothetical protein.
  
     0.534
AFW93115.1
YcfA family protein.
  
 
  0.502
AFW93662.1
Hypothetical protein.
  
     0.485
AFW96808.1
YcfA-like protein.
  
 
  0.457
AFW94114.1
Hypothetical protein.
  
  
  0.452
AFW96190.1
Hypothetical protein.
       0.437
AFW96191.1
ATPase.
       0.437
AFW93230.1
HTH domain-containing protein.
  
  
  0.434
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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