Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFW96214.1Hypothetical protein. (164 aa)    
Predicted Functional Partners:
AFW94096.1
Hypothetical protein.
  
 
 0.844
AFW95257.1
Pectin lyase fold/virulence factor.
  
 
 0.832
AFW96898.1
Pectin lyase fold/virulence factor.
  
 
 0.799
AFW95399.1
Hypothetical protein.
  
     0.774
AFW96066.1
Cell wall hydrolase/autolysin.
  
     0.772
AFW96551.1
Hypothetical protein.
  
     0.759
AFW93033.1
OstA family protein.
  
  
 0.755
AFW97152.1
Hypothetical protein.
  
     0.749
hetF
Heterocyst differentiation protein HetF.
  
     0.742
AFW93595.1
Hypothetical protein.
   
 0.741
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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