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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW96283.1TPR repeat-containing protein. (383 aa)    
Predicted Functional Partners:
AFW94326.1
Serine/threonine protein kinase.
 
 0.841
AFW96407.1
Ankyrin repeat-containing protein.
  
 0.840
AFW95614.1
Glycerol kinase; Incomplete N terminus.
   
 0.829
alaS-2
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
 0.815
AFW93612.1
mov34/MPN/PAD-1 family protein.
   
  0.735
AFW94933.1
TPR repeat-containing protein.
   0.697
AFW93112.1
TPR domain-containing protein.
 
0.696
AFW94779.1
WD-40 repeat-containing protein.
  
  0.682
prc
Carboxyl-terminal protease; Belongs to the peptidase S41A family.
   
 
 0.620
AFW95176.1
C-terminal processing peptidase; Belongs to the peptidase S41A family.
   
 
 0.620
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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