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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW96289.1WD-40 repeat-containing protein. (439 aa)    
Predicted Functional Partners:
AFW96290.1
Extracellular ligand-binding receptor.
 
     0.810
AFW94828.1
Hypothetical protein.
  
     0.774
AFW95802.1
Hypothetical protein.
  
     0.720
tilS
tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
  
    0.703
AFW97043.1
FHA domain-containing protein.
  
 
   0.696
AFW93678.1
Hypothetical protein.
  
     0.695
AFW96291.1
Serine/threonine protein kinase.
       0.686
AFW94759.1
SNF2 family helicase-like protein.
   
 0.654
AFW97052.1
Hypothetical protein.
  
     0.613
AFW92882.1
TPR repeat domain-containing protein.
  
 
  0.609
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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