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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW96434.1Periplasmic transport calcium-binding protein. (2751 aa)    
Predicted Functional Partners:
AFW96435.1
Galactose-binding domain-containing concanavalin A-like glucanase.
 
  
0.796
AFW96436.1
PA14 domain-containing protein.
  
 0.770
AFW96133.1
Type A von Willebrand factor.
  
     0.769
AFW95224.1
Hypothetical protein.
  
     0.724
AFW96116.1
Peptidase C14 family protein.
 
    0.714
AFW94190.1
Hypothetical protein.
  
   0.705
AFW93111.1
IS4 family transposase.
  
     0.635
AFW95826.1
IS4 family transposase.
  
     0.635
AFW94466.1
Polar amino acid ABC transporter ATP-binding protein.
 
 
 0.631
AFW94465.1
Polar amino acid ABC transporter permease protein.
 
 
 0.623
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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