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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW96486.1Hypothetical protein. (891 aa)    
Predicted Functional Partners:
AFW96485.1
Hypothetical protein.
       0.756
AFW96487.1
Hypothetical protein.
       0.671
AFW93140.1
Two-component response regulator.
 
 
 0.625
sigF
RNA polymerase sigma factor SigF; Belongs to the sigma-70 factor family.
  
  
 0.618
AFW93283.1
Signal transduction histidine kinase.
  
 
 0.615
AFW95163.1
Two-component hybrid sensor and regulator.
  
 
 0.615
AFW94836.1
IS1380 family transposase.
  
     0.569
AFW95303.1
IS1380 family transposase.
  
     0.569
AFW95762.1
IS 1380 family transposase.
  
     0.569
AFW96015.1
IS1380 family transposase.
  
     0.569
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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