STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW96574.1Pheophorbide a oxygenase. (443 aa)    
Predicted Functional Partners:
AFW96575.1
Hypothetical protein.
       0.550
AFW93952.1
Hypothetical protein.
  
     0.508
chlG
Chlorophyll synthase.
     
  0.499
AFW93538.1
Hypothetical protein.
  
     0.497
AFW94328.1
Carotenoid oxygenase.
  
     0.497
AFW96000.1
Hypothetical protein.
  
     0.475
AFW94187.1
Hypothetical protein.
  
     0.457
AFW96910.1
Hypothetical protein.
  
     0.436
AFW95825.1
Hypothetical protein.
  
     0.417
xisA-2
nifD element site-specific recombinase.
  
     0.412
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.