Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFW96593.1Transglutaminase domain-containing protein. (560 aa)    
Predicted Functional Partners:
AFW96037.1
Hypothetical protein.
  
     0.765
AFW94885.1
LOR/SDH bifunctional protein.
  
     0.744
AFW94165.1
Hypothetical protein.
  
     0.736
AFW93033.1
OstA family protein.
  
    0.733
apcE
Phycobilisome linker polypeptide ApcE; Belongs to the phycobilisome linker protein family.
  
     0.724
AFW96594.1
Hypothetical protein.
       0.709
AFW94805.1
Hypothetical protein.
  
     0.702
AFW94097.1
Hypothetical protein.
 
  
  0.699
AFW97146.1
TPR repeat-containing protein.
  
     0.666
AFW93388.1
Hypothetical protein.
  
     0.658
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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