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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW96638.1HAD-superfamily hydrolase, subfamily IA, variant 1. (244 aa)    
Predicted Functional Partners:
AFW95587.1
Haloacid dehalogenase-like hydrolase.
  
  
 0.933
AFW95440.1
FAD binding domain-containing protein.
    
 0.905
glcD
Glycolate oxidase subunit GlcD.
    
 0.905
rbcL
Ribulose-bisphosphate carboxylase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.
     
 0.904
rbcS
Ribulose-bisphosphate carboxylase small subunit.
     
 0.901
AFW95441.1
Fe-S binding subunit-containing protein.
    
 0.900
AFW96639.1
30S ribosomal protein S1.
  
    0.556
AFW96637.1
TspO and MBR like protein.
       0.517
AFW96268.1
Hypothetical protein.
  
 
   0.476
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
  
    0.465
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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