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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW96650.1NHL repeat-containing protein. (745 aa)    
Predicted Functional Partners:
petE
Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I.
 
 
   0.788
AFW93601.1
Hypothetical protein.
  
     0.763
AFW96869.1
Hypothetical protein.
  
     0.756
AFW95171.1
Hypothetical protein.
  
     0.748
AFW97106.1
TPR repeat-containing protein.
  
     0.747
AFW95800.1
Hypothetical protein.
  
     0.735
AFW96649.1
Glycosyl transferase group 1.
 
    0.728
AFW95424.1
Hypothetical protein.
  
     0.721
AFW93367.1
Hypothetical protein.
  
     0.716
aptA1
Nonribosomal peptide synthetase anabaenopeptin synthetase AptA1.
  
    0.714
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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