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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW96848.1TonB family protein. (478 aa)    
Predicted Functional Partners:
AFW95944.1
TonB-dependent receptor.
 
 
 
 0.964
AFW96029.1
Biopolymer transport protein ExbD/TolR.
 
 
 0.940
AFW94580.1
Biopolymer transport protein.
 
 
 0.928
AFW96030.1
MotA/TolQ/ExbB proton channel.
 
 
 0.924
AFW94579.1
Biopolymer transport protein.
 
 
 0.909
sepJ
Cell adhesion protein.
 
  
 0.732
psaK
Photosystem I reaction center protein PsaK.
  
     0.677
AFW96650.1
NHL repeat-containing protein.
 
    0.660
AFW95793.1
Hypothetical protein.
   
 
 0.588
AFW96275.1
Six-bladed beta-propeller domain-containing protein.
   
 
 0.588
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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