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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW96897.1Hypothetical protein. (82 aa)    
Predicted Functional Partners:
AFW93312.1
Hypothetical protein.
  
     0.686
psbT
Photosystem II protein PsbT; Seems to play a role in the dimerization of PSII. Belongs to the PsbT family.
  
     0.614
AFW94128.1
Hypothetical protein.
  
     0.600
AFW95582.1
Hypothetical protein.
  
     0.558
AFW96304.1
Putative restriction endonuclease.
  
     0.542
AFW94688.1
Hypothetical protein.
  
     0.528
AFW95924.1
Hypothetical protein.
  
     0.526
AFW96624.1
Heavy metal transport/detoxification protein.
  
     0.516
AFW96861.1
Hypothetical protein.
  
     0.515
AFW96024.1
Cyclase/dehydrase; Similar to streptomyces cyclase/dehydrase.
  
     0.505
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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