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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW97003.1Transport-associated protein. (147 aa)    
Predicted Functional Partners:
AFW96864.1
CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
 
    0.707
AFW96867.1
CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
 
    0.666
AFW94360.1
Hypothetical protein.
  
     0.660
AFW93328.1
Pseudouridylate synthase.
  
     0.639
AFW92847.1
Glycosyltransferase.
  
     0.625
AFW94780.1
Hypothetical protein.
  
     0.625
AFW92854.1
Hypothetical protein.
  
     0.600
AFW94722.1
IS630 family transposase.
  
     0.574
AFW94572.1
Hypothetical protein.
  
     0.560
nblA
Phycobilisome degradation protein NblA.
  
     0.545
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.