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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW97069.1Cyclophilin type peptidyl-prolyl cis-trans isomerase. (368 aa)    
Predicted Functional Partners:
mcyG
Peptide synthetase polyketide synthase fusion protein McyG.
  
 
 0.969
AFW94293.1
Modular nonribosomal peptide synthetase.
   
 
 0.947
AFW94759.1
SNF2 family helicase-like protein.
  
 0.911
mcyD
Polyketide synthase type 1 McyD.
   
 
 0.890
AFW95083.1
Heat shock protein 90.
   
 0.851
psaF
Photosystem I reaction center subunit III PsaF.
  
 
   0.819
rplU
Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
 
   0.743
AFW95663.1
Ribosome biogenesis GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
  
   0.737
AFW93405.1
Manganese and iron superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.716
psbO
Photosystem II manganese-stabilizing protein PsbO.
  
     0.715
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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