Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ccmK1Carbon dioxide concentrating mechanism protein. (103 aa)    
Predicted Functional Partners:
ccmL
Carbon dioxide concentrating mechanism protein.
 
 
 
 0.965
ccmM
Ribulose bisphosphate carboxylase small chain.
   
 
 0.832
ccmN
Carbon dioxide concentrating mechanism protein.
    
 
 0.752
ccmK2-2
Carbon dioxide concentrating mechanism protein.
 
   
0.658
rbcL
Ribulose-bisphosphate carboxylase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.
     
 0.573
rbcS
Ribulose-bisphosphate carboxylase small subunit.
   
 
 0.571
AFW97017.1
Hypothetical protein.
    
   0.530
AFW95016.1
Microcompartments protein.
 
 
 
 0.527
rbcX
RbcX protein.
      
 0.513
AFW97134.1
Alpha/beta hydrolase.
       0.449
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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