STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DpseGA30948Sm domain-containing protein. (97 aa)    
Predicted Functional Partners:
DpseGA28475
Uncharacterized protein, isoform A.
   
 0.976
Q298A9
Small nuclear ribonucleoprotein D2.
   
 0.908
B5E133
Small nuclear ribonucleoprotein D3.
   
 0.900
Q292C3
Small nuclear ribonucleoprotein F.
   
 0.898
B5DW06
Small nuclear ribonucleoprotein G.
   
 0.884
DpseGA18235
Uncharacterized protein.
   
 0.878
Q29AG5
116 kDa U5 small nuclear ribonucleoprotein component.
   
 0.864
Q28ZY1
N-alpha-acetyltransferase 35, NatC auxiliary subunit.
    
 0.857
DpseGA17553
Uncharacterized protein, isoform A.
   
 0.848
DpseGA17684
Uncharacterized protein.
    
 0.845
Your Current Organism:
Drosophila pseudoobscura
NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.