STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DpseGA28030Uncharacterized protein. (275 aa)    
Predicted Functional Partners:
Q296E3
Ras-related GTP-binding protein A/B.
   
 0.579
Q28YR8
Ragulator complex protein LAMTOR2.
    
 0.534
Q293W7
Regulating synaptic membrane exocytosis protein 2.
   
 
 0.510
Q28ZX7
Ras-related GTP-binding protein C/D.
    
 0.497
DpseGA12812
Uncharacterized protein.
    
 0.493
DpseGA13265
Uncharacterized protein.
    
 0.489
GA13399
Ragulator complex protein LAMTOR4 homolog; Regulator of the TOR pathway, a signaling cascade that promotes cell growth in response to growth factors, energy levels, and amino acids. As part of the Ragulator complex, may activate the TOR signaling cascade in response to amino acids (By similarity).
    
 0.483
DpseGA11464
Uncharacterized protein, isoform C.
   
 
 0.444
Q29BS3
V-type H+-transporting ATPase subunit B.
    
 0.411
Q28ZB3
5'-AMP-activated protein kinase, regulatory beta subunit.
    
 0.400
Your Current Organism:
Drosophila pseudoobscura
NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura
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