STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DpseGA29215Fe2OG dioxygenase domain-containing protein. (508 aa)    
Predicted Functional Partners:
DpseGA12802
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
     
 0.658
DpseGA22466
Uncharacterized protein.
     
  0.650
DpseGA28789
Uncharacterized protein.
     
  0.650
DpseGA27987
Uncharacterized protein.
     
  0.650
DpseGA27986
Uncharacterized protein, isoform A.
     
  0.650
DpseGA27985
Uncharacterized protein.
     
  0.650
B5E1B9
Uncharacterized protein.
     
  0.650
Q28XX2
Uncharacterized protein.
     
  0.650
Q28XX6
Uncharacterized protein.
     
  0.650
Q291T8
Uncharacterized protein.
     
  0.650
Your Current Organism:
Drosophila pseudoobscura
NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.