STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q28XJ9H/ACA ribonucleoprotein complex subunit 3. (64 aa)    
Predicted Functional Partners:
DpseGA18767
Ribosomal_L7Ae domain-containing protein.
   
 0.999
DpseGA27857
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
   
 0.998
B5DZ83
H/ACA ribonucleoprotein complex subunit 4.
   
 0.998
DpseGA17798
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.991
B5DZE3
Mitochondrial mRNA pseudouridine synthase TRUB2.
   
 0.967
DpseGA22144
S1 motif domain-containing protein.
  
  
 0.960
DpseGA21626
Uncharacterized protein.
    
 0.952
DpseGA10257
Uncharacterized protein.
   
 
 0.940
Q294R7
Uncharacterized protein.
   
 
 0.934
Q290Z9
Uncharacterized protein.
   
 0.926
Your Current Organism:
Drosophila pseudoobscura
NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.