STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q28YB2[histone H3]-trimethyl-L-lysine9/36 demethylase. (492 aa)    
Predicted Functional Partners:
A0A0R3NIW8
F-box and leucine-rich repeat protein 10/11.
    
 
 0.691
DpseGA31256
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.684
DpseGA14350
SWIRM domain-containing protein.
   
 0.658
B5DYI5
Uncharacterized protein.
      
 0.596
DpseGA31463
Uncharacterized protein.
    
 0.569
DpseGA32645
Uncharacterized protein.
    
 0.569
DpseGA19158
Histone H3; Belongs to the histone H3 family.
    
 0.569
Dpse_cid
Cid.
    
 0.560
Q28ZH2
Myeloid differentiation primary response protein MyD88.
    
 0.543
Q294C2
Serine-protein kinase ATM.
     
 0.527
Your Current Organism:
Drosophila pseudoobscura
NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura
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