Q291A7 protein (Drosophila pseudoobscura) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Q291A7

Nuclear GTP-binding protein. (676 aa)

Predicted Functional Partners:

B5DWM0

0.999

Q28ZG8

0.999

DpseGA31856

0.997

Q293T4

0.997

DpseGA14699

0.996

Q293T8

0.995

GA18135

0.995

DpseGA10407

0.994

DpseGA16779

0.993

Q28ZB7

0.992

Your Current Organism:

Drosophila pseudoobscura

NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B5DWM0	DpseGA10407	B5DWM0	Q2LZA8	Nuclear GTP-binding protein.	Peptidase_M24 domain-containing protein.	0.993
B5DWM0	DpseGA14699	B5DWM0	Q29GS2	Nuclear GTP-binding protein.	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.	0.973
B5DWM0	DpseGA16779	B5DWM0	Q29JJ2	Nuclear GTP-binding protein.	C2H2-type domain-containing protein.	0.977
B5DWM0	DpseGA31856	B5DWM0	A0A0R3P203	Nuclear GTP-binding protein.	Uncharacterized protein.	0.997
B5DWM0	GA18135	B5DWM0	Q29NB4	Nuclear GTP-binding protein.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.999
B5DWM0	Q28ZB7	B5DWM0	Q28ZB7	Nuclear GTP-binding protein.	Uncharacterized protein.	0.993
B5DWM0	Q28ZG8	B5DWM0	Q28ZG8	Nuclear GTP-binding protein.	Nucleolar GTP-binding protein.	0.998
B5DWM0	Q291A7	B5DWM0	Q291A7	Nuclear GTP-binding protein.	Nuclear GTP-binding protein.	0.999
B5DWM0	Q293T4	B5DWM0	Q293T4	Nuclear GTP-binding protein.	Large subunit ribosomal protein L24e.	0.992
B5DWM0	Q293T8	B5DWM0	Q293T8	Nuclear GTP-binding protein.	Ribosome production factor 2.	0.994
DpseGA10407	B5DWM0	Q2LZA8	B5DWM0	Peptidase_M24 domain-containing protein.	Nuclear GTP-binding protein.	0.993
DpseGA10407	DpseGA14699	Q2LZA8	Q29GS2	Peptidase_M24 domain-containing protein.	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.	0.986
DpseGA10407	DpseGA16779	Q2LZA8	Q29JJ2	Peptidase_M24 domain-containing protein.	C2H2-type domain-containing protein.	0.953
DpseGA10407	DpseGA31856	Q2LZA8	A0A0R3P203	Peptidase_M24 domain-containing protein.	Uncharacterized protein.	0.988
DpseGA10407	GA18135	Q2LZA8	Q29NB4	Peptidase_M24 domain-containing protein.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.988
DpseGA10407	Q28ZB7	Q2LZA8	Q28ZB7	Peptidase_M24 domain-containing protein.	Uncharacterized protein.	0.967
DpseGA10407	Q28ZG8	Q2LZA8	Q28ZG8	Peptidase_M24 domain-containing protein.	Nucleolar GTP-binding protein.	0.994
DpseGA10407	Q291A7	Q2LZA8	Q291A7	Peptidase_M24 domain-containing protein.	Nuclear GTP-binding protein.	0.994
DpseGA10407	Q293T4	Q2LZA8	Q293T4	Peptidase_M24 domain-containing protein.	Large subunit ribosomal protein L24e.	0.987
DpseGA10407	Q293T8	Q2LZA8	Q293T8	Peptidase_M24 domain-containing protein.	Ribosome production factor 2.	0.989