STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q29BG6Uncharacterized protein. (413 aa)    
Predicted Functional Partners:
DpseGA13268
TPR_REGION domain-containing protein.
   
 0.986
Q290L3
Uncharacterized protein, isoform A.
   
 
 0.954
DpseGA20642
RING-type domain-containing protein.
     
 0.954
DpseGA24218
Ubiquitin-like domain-containing protein.
    
  0.943
Q28YN0
Uncharacterized protein.
    
 0.931
DpseGA18085
Pex14_N domain-containing protein.
    
 0.931
DpseGA27671
Pex2_Pex12 domain-containing protein.
   
 0.927
DpseGA17579
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 0.927
DpseGA15543
Ubiquitin-like domain-containing protein.
    
  0.924
DpseGA18290
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.899
Your Current Organism:
Drosophila pseudoobscura
NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.