STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DpseGA16826Codanin-1_C domain-containing protein. (1234 aa)    
Predicted Functional Partners:
A0A0R3NI42
Uncharacterized protein, isoform D.
    
 
 0.699
DpseGA23730
Uncharacterized protein.
    
 
 0.586
DpseGA17100
Uncharacterized protein; Belongs to the MAGUK family.
    
 
 0.566
B5DYA2
Uncharacterized protein.
    
 
 0.558
DpseGA21747
Uncharacterized protein.
    
 
 0.558
Q28Z17
Epidermal growth factor receptor substrate 15.
      
 0.483
I5ANM9
Uncharacterized protein, isoform A.
      
 0.470
Q29CE6
Uncharacterized protein.
      
 0.454
Your Current Organism:
Drosophila pseudoobscura
NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.