STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DpseGA11717WD_REPEATS_REGION domain-containing protein. (513 aa)    
Predicted Functional Partners:
Q293T4
Large subunit ribosomal protein L24e.
   
 
 0.966
Q293T8
Ribosome production factor 2.
   
 
 0.954
Q29CG9
60S ribosome subunit biogenesis protein NIP7.
   
 
 0.930
Q29CE7
RRNA-processing protein EBP2.
   
 
 0.929
DpseGA16790
Brix domain-containing protein.
   
 
 0.911
Q28ZD5
MRNA turnover protein 4.
   
 
 0.910
DpseGA16881
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
  
 0.897
DpseGA10466
Protein MAK16 homolog; Belongs to the MAK16 family.
   
 
 0.896
B5DWM0
Nuclear GTP-binding protein.
   
  
 0.893
Q28ZG8
Nucleolar GTP-binding protein.
   
 
 0.893
Your Current Organism:
Drosophila pseudoobscura
NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.