STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DpseGA19647Uncharacterized protein. (368 aa)    
Predicted Functional Partners:
wuho
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wuho; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Required during gametogenesis; Belongs to the WD repeat TRM82 family.
   
 0.988
DpseGA17749
Uncharacterized protein.
   
 0.978
DpseGA16534
Uncharacterized protein.
    
 0.974
Q291V3
SAGA-associated factor 29.
    
 
 0.961
Q29A63
Transcription initiation factor TFIID subunit 5.
    
 
 0.960
Q299A8
Uncharacterized protein, isoform A.
    
 
 0.957
DpseGA28253
Uncharacterized protein, isoform A.
    
 0.829
Q296Z9
TRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit.
  
 
 0.820
B5DW71
Uncharacterized protein.
   
    0.783
Q28WQ6
Ribosome biogenesis protein NSA1.
   
    0.762
Your Current Organism:
Drosophila pseudoobscura
NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura
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