STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DpseGA14764Uncharacterized protein, isoform A. (1059 aa)    
Predicted Functional Partners:
DpseGA15182
Uncharacterized protein, isoform C.
    
 0.985
DpseGA16761
Uncharacterized protein, isoform B.
   
 0.907
DpseGA27746
TFIIB-type domain-containing protein.
   
 0.868
I5ANI6
Transcription initiation factor TFIIA large subunit.
   
 0.864
DpseGA17941
TAFII28 domain-containing protein.
   
 0.859
Q29A77
Transcription factor IIIB 90 kDa subunit.
   
 0.857
DpseGA26884
Uncharacterized protein.
    
 0.856
DpseGA23812
Peptidase_M1 domain-containing protein.
    
 0.856
Q296T4
Transcription initiation factor TFIID subunit 1.
    
 0.856
DpseGA10547
Uncharacterized protein.
   
 0.855
Your Current Organism:
Drosophila pseudoobscura
NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.