STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DpseGA21823N-acetyltransferase domain-containing protein. (221 aa)    
Predicted Functional Partners:
Q290C9
Uncharacterized protein.
  
 
  0.492
DpseGA21833
CHK domain-containing protein.
  
   
 0.487
Q29B08
Uncharacterized protein.
   
 
 0.476
DpseGA12229
CHK domain-containing protein.
  
     0.472
DpseGA16593
CHK domain-containing protein.
  
     0.470
Q296N2
Uncharacterized protein, isoform A.
  
     0.465
DpseGA21834
CHK domain-containing protein.
  
     0.463
DpseGA23360
Uncharacterized protein.
  
    0.455
Q290D2
Uncharacterized protein.
  
     0.450
DpseGA22521
CHK domain-containing protein.
  
     0.446
Your Current Organism:
Drosophila pseudoobscura
NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura
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