STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DpseGA16534Uncharacterized protein. (305 aa)    
Predicted Functional Partners:
DpseGA28253
Uncharacterized protein, isoform A.
    
 0.993
DpseGA26884
Uncharacterized protein.
   
 0.990
DpseGA15905
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.990
Q295S8
Transcription initiation protein SPT3.
    
 
 0.989
A0A0R3NJA5
Transcription initiation factor TFIID subunit 12.
    
 
 0.986
DpseGA20099
Uncharacterized protein.
    
 0.979
DpseGA19647
Uncharacterized protein.
    
 0.974
Sgf11
SAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. Required for nuclear receptor-mediated transactivation. Binds independently on SAGA to promoters in an RNA- dependent manner. Bind [...]
    
 0.973
DpseGA17962
Uncharacterized protein.
    
 0.970
DpseGA22084
Uncharacterized protein, isoform B.
    
 0.968
Your Current Organism:
Drosophila pseudoobscura
NCBI taxonomy Id: 46245
Other names: D. pseudoobscura pseudoobscura, Drosophila pseudoobscura pseudoobscura
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.