Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCB79587.1 | SCB79612.1 | GA0061075_102169 | GA0061075_102170 | Organic hydroperoxide reductase OsmC/OhrA. | Hypothetical protein. | 0.429 |
SCB79612.1 | SCB79587.1 | GA0061075_102170 | GA0061075_102169 | Hypothetical protein. | Organic hydroperoxide reductase OsmC/OhrA. | 0.429 |
SCB79612.1 | SCB79636.1 | GA0061075_102170 | GA0061075_102171 | Hypothetical protein. | ComK protein. | 0.697 |
SCB79612.1 | SCB79663.1 | GA0061075_102170 | GA0061075_102172 | Hypothetical protein. | methylated-DNA-[protein]-cysteine S-methyltransferase. | 0.645 |
SCB79612.1 | SCB79688.1 | GA0061075_102170 | GA0061075_102173 | Hypothetical protein. | Predicted oxidoreductase. | 0.444 |
SCB79636.1 | SCB79612.1 | GA0061075_102171 | GA0061075_102170 | ComK protein. | Hypothetical protein. | 0.697 |
SCB79636.1 | SCB79663.1 | GA0061075_102171 | GA0061075_102172 | ComK protein. | methylated-DNA-[protein]-cysteine S-methyltransferase. | 0.714 |
SCB79636.1 | SCB79688.1 | GA0061075_102171 | GA0061075_102173 | ComK protein. | Predicted oxidoreductase. | 0.486 |
SCB79663.1 | SCB79612.1 | GA0061075_102172 | GA0061075_102170 | methylated-DNA-[protein]-cysteine S-methyltransferase. | Hypothetical protein. | 0.645 |
SCB79663.1 | SCB79636.1 | GA0061075_102172 | GA0061075_102171 | methylated-DNA-[protein]-cysteine S-methyltransferase. | ComK protein. | 0.714 |
SCB79663.1 | SCB79688.1 | GA0061075_102172 | GA0061075_102173 | methylated-DNA-[protein]-cysteine S-methyltransferase. | Predicted oxidoreductase. | 0.551 |
SCB79688.1 | SCB79612.1 | GA0061075_102173 | GA0061075_102170 | Predicted oxidoreductase. | Hypothetical protein. | 0.444 |
SCB79688.1 | SCB79636.1 | GA0061075_102173 | GA0061075_102171 | Predicted oxidoreductase. | ComK protein. | 0.486 |
SCB79688.1 | SCB79663.1 | GA0061075_102173 | GA0061075_102172 | Predicted oxidoreductase. | methylated-DNA-[protein]-cysteine S-methyltransferase. | 0.551 |