STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB80995.1ABC-type proline/glycine betaine transport system, permease component. (248 aa)    
Predicted Functional Partners:
SCB81023.1
Glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein).
  
 0.999
SCB81043.1
Osmoprotectant transport system ATP-binding protein.
 
 0.998
SCC09231.1
Osmoprotectant transport system ATP-binding protein.
 
 0.991
SCC09211.1
Osmoprotectant transport system permease protein.
 
  
0.888
SCB81061.1
Glutathione reductase (NADPH).
     
 0.645
SCC00881.1
Glycine betaine/proline transport system substrate-binding protein.
 
  
0.604
SCB93278.1
Glycine betaine/proline transport system substrate-binding protein.
 
  
0.600
SCB93256.1
Glycine betaine/proline transport system ATP-binding protein.
  
 0.541
adhE
Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.433
SCB80958.1
Protein of unknown function.
       0.429
Your Current Organism:
Weissella hellenica
NCBI taxonomy Id: 46256
Other names: ATCC 51523, CCUG 33494, DSM 7378, IFO 15553, JCM 10103, LMG 15125, LMG:15125, NBRC 15553, NCFB 2973, NCIMB 702973, W. hellenica, strain LV346
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.