STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANN76022.1Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (401 aa)    
Predicted Functional Partners:
BAU07_01790
RND transporter; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.960
ANN80009.1
Multidrug efflux RND transporter permease subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.871
ANN76053.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.860
ANN76920.1
Multidrug efflux RND transporter permease subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.854
ANN77642.1
Multidrug efflux RND transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.852
ANN80163.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.764
ANN78156.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.739
ANN76197.1
RND transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.726
ANN76405.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.721
ANN80398.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.719
Your Current Organism:
Bordetella flabilis
NCBI taxonomy Id: 463014
Other names: B. flabilis, Bordetella flabilis Vandamme et al. 2015, Bordetella sp. AU10664, CCUG 56827, LMG 28642, LMG:28642, strain AU10664
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