Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANN76449.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (490 aa)    
Predicted Functional Partners:
ANN77527.1
Hexuronate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.695
ANN80601.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.656
ANN76521.1
Citrate-proton symporter; Is involved in the uptake of citrate and the transport of protons into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.614
ANN80230.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.610
ANN79347.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.557
ANN76425.1
MFS transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.555
ANN79346.1
Sodium:solute symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.513
ANN76959.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.499
ANN77082.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.498
ANN80225.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.492
Your Current Organism:
Bordetella flabilis
NCBI taxonomy Id: 463014
Other names: B. flabilis, Bordetella flabilis Vandamme et al. 2015, Bordetella sp. AU10664, CCUG 56827, LMG 28642, LMG:28642, strain AU10664
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