STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANN77179.13-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)    
Predicted Functional Partners:
ANN76218.1
NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.922
ANN76219.1
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.908
ANN77747.1
2-keto-4-pentenoate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.908
ANN76289.1
3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.903
ANN77177.1
Gluconolaconase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.716
ANN77180.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.709
ANN77181.1
Mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.709
ANN77182.1
Myristoyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.709
ANN77178.1
Myristoyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.675
ANN75950.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.653
Your Current Organism:
Bordetella flabilis
NCBI taxonomy Id: 463014
Other names: B. flabilis, Bordetella flabilis Vandamme et al. 2015, Bordetella sp. AU10664, CCUG 56827, LMG 28642, LMG:28642, strain AU10664
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.