Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANN77572.1Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (325 aa)    
Predicted Functional Partners:
ANN77574.1
Fusaric acid resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.959
ANN77575.1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.925
ANN77573.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.915
ANN80398.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.908
ANN80303.1
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.609
ANN78156.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.607
ANN76584.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.604
ANN77288.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.590
ANN76197.1
RND transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.583
ANN76405.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.580
Your Current Organism:
Bordetella flabilis
NCBI taxonomy Id: 463014
Other names: B. flabilis, Bordetella flabilis Vandamme et al. 2015, Bordetella sp. AU10664, CCUG 56827, LMG 28642, LMG:28642, strain AU10664
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