Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
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[Homology]
Score
ANN78335.1Cd(II)/Pb(II)-responsive transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)    
Predicted Functional Partners:
ANN78336.1
ATPase P; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.808
ANN78332.1
Copper-translocating P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.729
ANN80450.1
Copper resistance protein CopB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.718
ANN77829.1
Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.676
ANN77253.1
Arsenate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ArsC family.
   
  
 0.674
ANN76530.1
Ribonuclease BN; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.669
ANN77894.1
Arsenical-resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.644
ANN79437.1
Universal stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.643
ANN76225.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.642
ANN77665.1
Arsenate reductase (glutaredoxin); Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.635
Your Current Organism:
Bordetella flabilis
NCBI taxonomy Id: 463014
Other names: B. flabilis, Bordetella flabilis Vandamme et al. 2015, Bordetella sp. AU10664, CCUG 56827, LMG 28642, LMG:28642, strain AU10664
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