STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANN79312.1benzoyl-CoA oxygenase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology. (475 aa)    
Predicted Functional Partners:
ANN79313.1
benzoyl-CoA-dihydrodiol lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.997
ANN79311.1
benzoyl-CoA oxygenase/reductase, BoxA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.996
aroK
Transcriptional regulator; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
 
   
 0.916
ANN79315.1
4-hydroxybenzoate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.834
ANN77134.1
1,2-phenylacetyl-CoA epoxidase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.701
BAU07_21270
Alpha/beta hydrolase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.673
ANN79310.1
Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.656
ANN79515.1
DUF4863 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.521
ANN77136.1
phenylacetate-CoA oxygenase subunit PaaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.485
ANN79309.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.478
Your Current Organism:
Bordetella flabilis
NCBI taxonomy Id: 463014
Other names: B. flabilis, Bordetella flabilis Vandamme et al. 2015, Bordetella sp. AU10664, CCUG 56827, LMG 28642, LMG:28642, strain AU10664
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