Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ANN79437.1Universal stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)    
Predicted Functional Partners:
ANN77665.1
Arsenate reductase (glutaredoxin); Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.774
ANN77253.1
Arsenate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ArsC family.
   
  
 0.763
ANN80450.1
Copper resistance protein CopB; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.750
ANN76530.1
Ribonuclease BN; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.727
ANN78332.1
Copper-translocating P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.706
ANN76225.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.703
ANN79438.1
TIGR01244 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.658
ANN78335.1
Cd(II)/Pb(II)-responsive transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.643
ANN77142.1
MATE family efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.635
ANN80093.1
MATE family efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.634
Your Current Organism:
Bordetella flabilis
NCBI taxonomy Id: 463014
Other names: B. flabilis, Bordetella flabilis Vandamme et al. 2015, Bordetella sp. AU10664, CCUG 56827, LMG 28642, LMG:28642, strain AU10664
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