Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANN79663.1C4-dicarboxylate ABC transporter; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (374 aa)    
Predicted Functional Partners:
ANN79665.1
C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.992
ANN79664.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.934
ANN78075.1
C4-dicarboxylate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.788
ANN79508.1
C4-dicarboxylate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.788
ANN78074.1
C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.786
ANN79507.1
C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.786
ANN79667.1
DUF2214 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.718
ANN79666.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.694
ANN78081.1
ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
  
  
 
0.512
ANN79509.1
ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
  
  
 
0.482
Your Current Organism:
Bordetella flabilis
NCBI taxonomy Id: 463014
Other names: B. flabilis, Bordetella flabilis Vandamme et al. 2015, Bordetella sp. AU10664, CCUG 56827, LMG 28642, LMG:28642, strain AU10664
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