STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANN72521.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)    
Predicted Functional Partners:
ANN72520.1
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.
       0.737
ANN73511.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.687
ANN73800.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.687
ANN74768.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.684
ANN73515.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.682
ANN72522.1
Mandelate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.655
ANN72519.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.585
BAU08_15215
(2Fe-2S)-binding protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.562
ANN72518.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.562
ANN72225.1
Tricarboxylate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.530
Your Current Organism:
Bordetella bronchialis
NCBI taxonomy Id: 463025
Other names: B. bronchialis, Bordetella bronchialis Vandamme et al. 2015, Bordetella genogroup 3, Bordetella genomosp. 3, Bordetella sp. AU3182, Bordetella sp. AU6843, Bordetella sp. AU7049, Bordetella sp. AU7089, CCUG 56828, LMG 28640, LMG:28640, strain AU3182
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.