STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trkDPotassium transporter Kup; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family. (636 aa)    
Predicted Functional Partners:
ANN74858.1
Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.796
ANN72778.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.488
ANN73341.1
Response regulator in two-component regulatory system with KdpD; regulates the kdp operon involved in potassium transport; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.485
ANN72471.1
Glutathione-regulated potassium-efflux system protein KefC; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
     
 0.466
ANN73282.1
Transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.466
ANN72780.1
Flagellar motor protein MotA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.459
ANN74113.1
Trk system potassium transport protein TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.459
pstB
Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
  
   
 0.454
ANN74859.1
Energy transducer TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
     0.443
ANN73340.1
Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.431
Your Current Organism:
Bordetella bronchialis
NCBI taxonomy Id: 463025
Other names: B. bronchialis, Bordetella bronchialis Vandamme et al. 2015, Bordetella genogroup 3, Bordetella genomosp. 3, Bordetella sp. AU3182, Bordetella sp. AU6843, Bordetella sp. AU7049, Bordetella sp. AU7089, CCUG 56828, LMG 28640, LMG:28640, strain AU3182
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