STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANN75019.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)    
Predicted Functional Partners:
ANN70939.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.623
ANN73924.1
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.599
ANN72073.1
NmrA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.557
ANN72633.1
Short-chain dehydrogenase/reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.422
apaH
Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
 0.422
ANN73923.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.414
ANN72638.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.406
Your Current Organism:
Bordetella bronchialis
NCBI taxonomy Id: 463025
Other names: B. bronchialis, Bordetella bronchialis Vandamme et al. 2015, Bordetella genogroup 3, Bordetella genomosp. 3, Bordetella sp. AU3182, Bordetella sp. AU6843, Bordetella sp. AU7049, Bordetella sp. AU7089, CCUG 56828, LMG 28640, LMG:28640, strain AU3182
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