Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFU30080.1 | SFU30099.1 | SAMN04487955_101174 | SAMN04487955_101175 | Hypothetical protein. | Hypothetical protein. | 0.506 |
SFU30099.1 | SFU30080.1 | SAMN04487955_101175 | SAMN04487955_101174 | Hypothetical protein. | Hypothetical protein. | 0.506 |
SFU30099.1 | SFU30113.1 | SAMN04487955_101175 | SAMN04487955_101176 | Hypothetical protein. | Tripartite ATP-independent transporter solute receptor, DctP family. | 0.588 |
SFU30099.1 | SFU30130.1 | SAMN04487955_101175 | SAMN04487955_101177 | Hypothetical protein. | TRAP-type C4-dicarboxylate transport system, small permease component. | 0.588 |
SFU30099.1 | SFU30148.1 | SAMN04487955_101175 | SAMN04487955_101178 | Hypothetical protein. | Tripartite ATP-independent transporter, DctM component. | 0.588 |
SFU30099.1 | SFU30167.1 | SAMN04487955_101175 | SAMN04487955_101179 | Hypothetical protein. | Hypothetical protein. | 0.576 |
SFU30099.1 | SFU31362.1 | SAMN04487955_101175 | SAMN04487955_101244 | Hypothetical protein. | Transcriptional regulator, XRE family with cupin sensor. | 0.495 |
SFU30099.1 | SFU89559.1 | SAMN04487955_101175 | SAMN04487955_1132 | Hypothetical protein. | Transcriptional regulator, XRE family with cupin sensor. | 0.495 |
SFU30099.1 | argA | SAMN04487955_101175 | SAMN04487955_104112 | Hypothetical protein. | N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. | 0.603 |
SFU30099.1 | aroK-2 | SAMN04487955_101175 | SAMN04487955_109175 | Hypothetical protein. | Transcriptional regulator, XRE family with shikimate kinase activity; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.505 |
SFU30113.1 | SFU30099.1 | SAMN04487955_101176 | SAMN04487955_101175 | Tripartite ATP-independent transporter solute receptor, DctP family. | Hypothetical protein. | 0.588 |
SFU30113.1 | SFU30130.1 | SAMN04487955_101176 | SAMN04487955_101177 | Tripartite ATP-independent transporter solute receptor, DctP family. | TRAP-type C4-dicarboxylate transport system, small permease component. | 0.994 |
SFU30113.1 | SFU30148.1 | SAMN04487955_101176 | SAMN04487955_101178 | Tripartite ATP-independent transporter solute receptor, DctP family. | Tripartite ATP-independent transporter, DctM component. | 0.994 |
SFU30113.1 | SFU30167.1 | SAMN04487955_101176 | SAMN04487955_101179 | Tripartite ATP-independent transporter solute receptor, DctP family. | Hypothetical protein. | 0.773 |
SFU30130.1 | SFU30099.1 | SAMN04487955_101177 | SAMN04487955_101175 | TRAP-type C4-dicarboxylate transport system, small permease component. | Hypothetical protein. | 0.588 |
SFU30130.1 | SFU30113.1 | SAMN04487955_101177 | SAMN04487955_101176 | TRAP-type C4-dicarboxylate transport system, small permease component. | Tripartite ATP-independent transporter solute receptor, DctP family. | 0.994 |
SFU30130.1 | SFU30148.1 | SAMN04487955_101177 | SAMN04487955_101178 | TRAP-type C4-dicarboxylate transport system, small permease component. | Tripartite ATP-independent transporter, DctM component. | 0.994 |
SFU30130.1 | SFU30167.1 | SAMN04487955_101177 | SAMN04487955_101179 | TRAP-type C4-dicarboxylate transport system, small permease component. | Hypothetical protein. | 0.757 |
SFU30148.1 | SFU30099.1 | SAMN04487955_101178 | SAMN04487955_101175 | Tripartite ATP-independent transporter, DctM component. | Hypothetical protein. | 0.588 |
SFU30148.1 | SFU30113.1 | SAMN04487955_101178 | SAMN04487955_101176 | Tripartite ATP-independent transporter, DctM component. | Tripartite ATP-independent transporter solute receptor, DctP family. | 0.994 |
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