STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gshAGlutamate-cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. (539 aa)    
Predicted Functional Partners:
gshB
Glutathione synthase; Belongs to the prokaryotic GSH synthase family.
  
 
 0.968
SFU80543.1
Dipeptidase D.
   
 
 0.930
SFU32728.1
Aromatic-amino-acid transaminase.
     
 0.924
SFU63917.1
Aminopeptidase N.
     
 0.922
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
     
 0.922
SFU30861.1
Gamma-glutamyltranspeptidase / glutathione hydrolase.
    
  0.921
SFU53485.1
L-glutamine synthetase.
     
 0.921
SFU58279.1
Gamma-glutamyltranspeptidase / glutathione hydrolase.
    
  0.921
SFU87241.1
Glutamine synthetase.
     
 0.921
SFU58560.1
Glutamate synthase (NADPH/NADH) small chain.
     
 0.916
Your Current Organism:
Halomonas korlensis
NCBI taxonomy Id: 463301
Other names: CGMCC 1.6981, DSM 19633, H. korlensis, Halomonas korlensis Li et al. 2008, strain XK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.