STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU44548.1NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (245 aa)    
Predicted Functional Partners:
SFU97513.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
  0.639
SFU44559.1
N-ethylmaleimide reductase.
 
    0.632
SFU80978.1
3-hydroxypropanoate dehydrogenase.
    
 0.577
SFU76346.1
L-threonine aldolase.
    
  0.565
SFU47882.1
L-gulonate 5-dehydrogenase.
     
  0.476
SFU44575.1
Transcriptional regulator, TetR family.
 
     0.455
tpx
Thiol peroxidase (atypical 2-Cys peroxiredoxin); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.
   
    0.436
SFU75979.1
Non-ribosomal peptide synthetase terminal domain of unknown function.
 
 
 0.409
Your Current Organism:
Halomonas korlensis
NCBI taxonomy Id: 463301
Other names: CGMCC 1.6981, DSM 19633, H. korlensis, Halomonas korlensis Li et al. 2008, strain XK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.