STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU80190.1Phage virion morphogenesis (putative tail completion) protein. (152 aa)    
Predicted Functional Partners:
SFU80272.1
Phage head completion protein (GPL).
 
  
 0.994
SFU80204.1
P2 phage tail completion protein R (GpR).
 
    0.993
SFU80259.1
P2-like prophage tail protein X.
 
    0.992
SFU80300.1
Phage major capsid protein, P2 family.
 
    0.986
SFU80314.1
Phage capsid scaffolding protein (GPO) serine peptidase.
 
    0.984
SFU80285.1
Phage small terminase subunit.
 
    0.982
SFU80342.1
Phage portal protein, PBSX family.
 
    0.978
SFU80328.1
Uncharacterized protein YjcR.
 
    0.976
SFU79917.1
Hypothetical protein.
 
    0.965
SFU79658.1
Bacteriophage replication gene A protein (GPA).
  
    0.962
Your Current Organism:
Halomonas korlensis
NCBI taxonomy Id: 463301
Other names: CGMCC 1.6981, DSM 19633, H. korlensis, Halomonas korlensis Li et al. 2008, strain XK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.