Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFU34972.1 | SFU86640.1 | SAMN04487955_101452 | SAMN04487955_111100 | Hypothetical protein. | DNA repair photolyase. | 0.478 |
SFU86618.1 | SFU86629.1 | SAMN04487955_11198 | SAMN04487955_11199 | Hypothetical protein. | Mo-co oxidoreductase dimerisation domain-containing protein. | 0.957 |
SFU86618.1 | SFU86640.1 | SAMN04487955_11198 | SAMN04487955_111100 | Hypothetical protein. | DNA repair photolyase. | 0.490 |
SFU86618.1 | SFU86676.1 | SAMN04487955_11198 | SAMN04487955_111103 | Hypothetical protein. | L-threonine O-3-phosphate decarboxylase. | 0.419 |
SFU86618.1 | SFU86722.1 | SAMN04487955_11198 | SAMN04487955_111107 | Hypothetical protein. | Adenosylcobinamide kinase. | 0.484 |
SFU86629.1 | SFU86618.1 | SAMN04487955_11199 | SAMN04487955_11198 | Mo-co oxidoreductase dimerisation domain-containing protein. | Hypothetical protein. | 0.957 |
SFU86629.1 | SFU86640.1 | SAMN04487955_11199 | SAMN04487955_111100 | Mo-co oxidoreductase dimerisation domain-containing protein. | DNA repair photolyase. | 0.497 |
SFU86629.1 | SFU86722.1 | SAMN04487955_11199 | SAMN04487955_111107 | Mo-co oxidoreductase dimerisation domain-containing protein. | Adenosylcobinamide kinase. | 0.430 |
SFU86640.1 | SFU34972.1 | SAMN04487955_111100 | SAMN04487955_101452 | DNA repair photolyase. | Hypothetical protein. | 0.478 |
SFU86640.1 | SFU86618.1 | SAMN04487955_111100 | SAMN04487955_11198 | DNA repair photolyase. | Hypothetical protein. | 0.490 |
SFU86640.1 | SFU86629.1 | SAMN04487955_111100 | SAMN04487955_11199 | DNA repair photolyase. | Mo-co oxidoreductase dimerisation domain-containing protein. | 0.497 |
SFU86640.1 | SFU86676.1 | SAMN04487955_111100 | SAMN04487955_111103 | DNA repair photolyase. | L-threonine O-3-phosphate decarboxylase. | 0.559 |
SFU86640.1 | SFU86685.1 | SAMN04487955_111100 | SAMN04487955_111104 | DNA repair photolyase. | Adenosylcobinamide kinase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate. | 0.579 |
SFU86640.1 | SFU86711.1 | SAMN04487955_111100 | SAMN04487955_111106 | DNA repair photolyase. | Alpha-ribazole phosphatase. | 0.529 |
SFU86640.1 | SFU86722.1 | SAMN04487955_111100 | SAMN04487955_111107 | DNA repair photolyase. | Adenosylcobinamide kinase. | 0.578 |
SFU86640.1 | cobD | SAMN04487955_111100 | SAMN04487955_111102 | DNA repair photolyase. | Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.617 |
SFU86640.1 | cobS | SAMN04487955_111100 | SAMN04487955_111105 | DNA repair photolyase. | Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.578 |
SFU86640.1 | cobT | SAMN04487955_111100 | SAMN04487955_111101 | DNA repair photolyase. | Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.618 |
SFU86676.1 | SFU86618.1 | SAMN04487955_111103 | SAMN04487955_11198 | L-threonine O-3-phosphate decarboxylase. | Hypothetical protein. | 0.419 |
SFU86676.1 | SFU86640.1 | SAMN04487955_111103 | SAMN04487955_111100 | L-threonine O-3-phosphate decarboxylase. | DNA repair photolyase. | 0.559 |
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